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Application of Fractional Calculus to Reaction-Subdiffusion Processes and Morphogen Gradient Formation

机译:分数阶微积分在反应 - 扩散过程中的应用   和morphogen梯度形成

摘要

It is a well known fact that subdiffusion equations in terms of fractionalderivatives can be obtained from Continuous Time Random Walk (CTRW) models withlong-tailed waiting time distributions. Over the last years various authorshave shown that extensions of such CTRW models incorporating reactive processesto the mesoscopic transport equations may lead to non-intuitivereaction-subdiffusion equations. In particular, one such equation has beenrecently derived for a subdiffusive random walker subject to a linear(first-order) death process. We take this equation as a starting point to studythe developmental biology key problem of morphogen gradient formation, both forthe uniform case where the morphogen degradation rate coefficient (reactivity)is constant and for the non-uniform case (position-dependent reactivity). Inthe uniform case we obtain exponentially decreasing stationary concentrationprofiles and we study their robustness with respect to perturbations in theincoming morphogen flux. In the non-uniform case we find a rich phenomenologyat the level of the stationary profiles. We conclude that the analytic form ofthe long-time morphogen concentration profiles is very sensitive to the spatialdependence of the reactivity and the specific value of the anomalous diffusioncoefficient.
机译:众所周知的事实是,可以从具有长尾等待时间分布的连续时间随机游走(CTRW)模型中获得基于分数导数的子扩散方程。在过去的几年中,各种作者已经表明,将反应过程结合到介观输运方程中的此类CTRW模型的扩展可能会导致非直观的反应-扩散方程。特别地,最近已经针对经受线性(一阶)死亡过程的亚扩散随机沃克推导了一个这样的方程。我们以这个方程为起点,研究形态发生剂梯度形成的发展生物学关键问题,无论是对于形态发生剂降解速率系数(反应性)恒定的均匀情况还是对于非均匀情况(取决于位置的反应性)。在均匀的情况下,我们获得了呈指数下降的固定浓度曲线,并研究了它们在进入的形态发生子通量中的扰动方面的鲁棒性。在非均匀情况下,我们在静止轮廓的水平上发现了丰富的现象学。我们得出结论,长期形态发生子浓度分布图的分析形式对反应性的空间依赖性和反常扩散系数的比值非常敏感。

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